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Getting started

  • Installation Instructions for Users

User Documentation

  • Commandline Usage
  • Grahical User Interface

Developer Documentation

  • Instructions for Developers

API Documentation

  • mip_dmp.cli
  • mip_dmp.plot
  • mip_dmp.process
  • mip_dmp.qt5
  • mip_dmp.ui
  • mip_dmp.utils

About mip_dmp

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  • Contributing
mip_dmp: Assistant for mapping datasets to the common schema of a federation of the Medical Informatics Platform
  • mip_dmp.process package

mip_dmp.process package

Submodules

  • mip_dmp.process.embedding module
    • chars2vec_embedding()
    • embedding_similarity()
    • find_n_closest_embeddings()
    • generate_embeddings()
    • glove_embedding()
    • reduce_embeddings_dimension()
  • mip_dmp.process.mapping module
    • apply_transform_map()
    • apply_transform_scale()
    • map_dataset()
    • transform_dataset_column()
  • mip_dmp.process.matching module
    • generate_initial_transform()
    • make_distance_vector()
    • make_initial_transform()
    • match_column_to_cdes()
    • match_columns_to_cdes()
  • mip_dmp.process.utils module
    • is_number()

Module contents

Sub-package for modules that provide processing functions for the MIP Dataset Mapper.


© Copyright 2023, The MIP team, University Hospital of Lausanne (CHUV), Switzerland & Contributors. Last updated on Aug 14, 2023.

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