Integration Tests of MIP Federations

Report generated on 06-Jun-2023 at 12:52:20 by pytest-html v3.2.0

Environment

Packages {"pluggy": "1.0.0", "pytest": "7.2.1"}
Platform Linux-5.15.0-1038-azure-x86_64-with-glibc2.31
Plugins {"html": "3.2.0", "metadata": "2.0.4"}
Python 3.9.16

Summary

4 tests ran in 138.11 seconds.

2 passed, 0 skipped, 2 failed, 0 errors, 0 expected failures, 0 unexpected passes

Results

Result Time Test Description Duration
Failed 2023-06-06 12:52:20.502442 test_public_mip.py::TestPublicMIP::test_data[https://hbpmip.link/] Integration tests (data) of the public MIP. 20.08
screenshot
self = <test_public_mip.TestPublicMIP object at 0x7f2cd96e2520>

def test_data(self):
"""Integration tests (data) of the public MIP."""
> super().test_data()

test_public_mip.py:24:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
basetest.py:63: in test_data
dementia = selenium_driver.find_element(
/usr/local/lib/python3.9/site-packages/selenium/webdriver/remote/webdriver.py:830: in find_element
return self.execute(Command.FIND_ELEMENT, {"using": by, "value": value})["value"]
/usr/local/lib/python3.9/site-packages/selenium/webdriver/remote/webdriver.py:440: in execute
self.error_handler.check_response(response)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _

self = <selenium.webdriver.remote.errorhandler.ErrorHandler object at 0x7f2cd96939a0>
response = {'status': 404, 'value': '{"value":{"error":"no such element","message":"no such element: Unable to locate element: {\...wn>\\n#16 0x561c0d6bcc97 \\u003Cunknown>\\n#17 0x561c0d6cd113 \\u003Cunknown>\\n#18 0x7f73a26e4ea7 start_thread\\n"}}'}

def check_response(self, response: Dict[str, Any]) -> None:
"""Checks that a JSON response from the WebDriver does not have an
error.

:Args:
- response - The JSON response from the WebDriver server as a dictionary
object.

:Raises: If the response contains an error message.
"""
status = response.get("status", None)
if not status or status == ErrorCode.SUCCESS:
return
value = None
message = response.get("message", "")
screen: str = response.get("screen", "")
stacktrace = None
if isinstance(status, int):
value_json = response.get("value", None)
if value_json and isinstance(value_json, str):
import json

try:
value = json.loads(value_json)
if len(value.keys()) == 1:
value = value["value"]
status = value.get("error", None)
if not status:
status = value.get("status", ErrorCode.UNKNOWN_ERROR)
message = value.get("value") or value.get("message")
if not isinstance(message, str):
value = message
message = message.get("message")
else:
message = value.get("message", None)
except ValueError:
pass

exception_class: Type[WebDriverException]
if status in ErrorCode.NO_SUCH_ELEMENT:
exception_class = NoSuchElementException
elif status in ErrorCode.NO_SUCH_FRAME:
exception_class = NoSuchFrameException
elif status in ErrorCode.NO_SUCH_SHADOW_ROOT:
exception_class = NoSuchShadowRootException
elif status in ErrorCode.NO_SUCH_WINDOW:
exception_class = NoSuchWindowException
elif status in ErrorCode.STALE_ELEMENT_REFERENCE:
exception_class = StaleElementReferenceException
elif status in ErrorCode.ELEMENT_NOT_VISIBLE:
exception_class = ElementNotVisibleException
elif status in ErrorCode.INVALID_ELEMENT_STATE:
exception_class = InvalidElementStateException
elif (
status in ErrorCode.INVALID_SELECTOR
or status in ErrorCode.INVALID_XPATH_SELECTOR
or status in ErrorCode.INVALID_XPATH_SELECTOR_RETURN_TYPER
):
exception_class = InvalidSelectorException
elif status in ErrorCode.ELEMENT_IS_NOT_SELECTABLE:
exception_class = ElementNotSelectableException
elif status in ErrorCode.ELEMENT_NOT_INTERACTABLE:
exception_class = ElementNotInteractableException
elif status in ErrorCode.INVALID_COOKIE_DOMAIN:
exception_class = InvalidCookieDomainException
elif status in ErrorCode.UNABLE_TO_SET_COOKIE:
exception_class = UnableToSetCookieException
elif status in ErrorCode.TIMEOUT:
exception_class = TimeoutException
elif status in ErrorCode.SCRIPT_TIMEOUT:
exception_class = TimeoutException
elif status in ErrorCode.UNKNOWN_ERROR:
exception_class = WebDriverException
elif status in ErrorCode.UNEXPECTED_ALERT_OPEN:
exception_class = UnexpectedAlertPresentException
elif status in ErrorCode.NO_ALERT_OPEN:
exception_class = NoAlertPresentException
elif status in ErrorCode.IME_NOT_AVAILABLE:
exception_class = ImeNotAvailableException
elif status in ErrorCode.IME_ENGINE_ACTIVATION_FAILED:
exception_class = ImeActivationFailedException
elif status in ErrorCode.MOVE_TARGET_OUT_OF_BOUNDS:
exception_class = MoveTargetOutOfBoundsException
elif status in ErrorCode.JAVASCRIPT_ERROR:
exception_class = JavascriptException
elif status in ErrorCode.SESSION_NOT_CREATED:
exception_class = SessionNotCreatedException
elif status in ErrorCode.INVALID_ARGUMENT:
exception_class = InvalidArgumentException
elif status in ErrorCode.NO_SUCH_COOKIE:
exception_class = NoSuchCookieException
elif status in ErrorCode.UNABLE_TO_CAPTURE_SCREEN:
exception_class = ScreenshotException
elif status in ErrorCode.ELEMENT_CLICK_INTERCEPTED:
exception_class = ElementClickInterceptedException
elif status in ErrorCode.INSECURE_CERTIFICATE:
exception_class = InsecureCertificateException
elif status in ErrorCode.INVALID_COORDINATES:
exception_class = InvalidCoordinatesException
elif status in ErrorCode.INVALID_SESSION_ID:
exception_class = InvalidSessionIdException
elif status in ErrorCode.UNKNOWN_METHOD:
exception_class = UnknownMethodException
else:
exception_class = WebDriverException
if not value:
value = response["value"]
if isinstance(value, str):
raise exception_class(value)
if message == "" and "message" in value:
message = value["message"]

screen = None # type: ignore[assignment]
if "screen" in value:
screen = value["screen"]

stacktrace = None
st_value = value.get("stackTrace") or value.get("stacktrace")
if st_value:
if isinstance(st_value, str):
stacktrace = st_value.split("\n")
else:
stacktrace = []
try:
for frame in st_value:
line = frame.get("lineNumber", "")
file = frame.get("fileName", "<anonymous>")
if line:
file = f"{file}:{line}"
meth = frame.get("methodName", "<anonymous>")
if "className" in frame:
meth = f"{frame['className']}.{meth}"
msg = " at %s (%s)"
msg = msg % (meth, file)
stacktrace.append(msg)
except TypeError:
pass
if exception_class == UnexpectedAlertPresentException:
alert_text = None
if "data" in value:
alert_text = value["data"].get("text")
elif "alert" in value:
alert_text = value["alert"].get("text")
raise exception_class(message, screen, stacktrace, alert_text) # type: ignore[call-arg] # mypy is not smart enough here
> raise exception_class(message, screen, stacktrace)
E selenium.common.exceptions.NoSuchElementException: Message: no such element: Unable to locate element: {"method":"xpath","selector":"//div[@id='pathology-select']/div/button"}
E (Session info: headless chrome=113.0.5672.126)
E Stacktrace:
E #0 0x561c0d6d5133 <unknown>
E #1 0x561c0d409966 <unknown>
E #2 0x561c0d4460dc <unknown>
E #3 0x561c0d446211 <unknown>
E #4 0x561c0d4806c4 <unknown>
E #5 0x561c0d465bfd <unknown>
E #6 0x561c0d47e1c7 <unknown>
E #7 0x561c0d4659a3 <unknown>
E #8 0x561c0d43a46a <unknown>
E #9 0x561c0d43b55e <unknown>
E #10 0x561c0d694cae <unknown>
E #11 0x561c0d6988fe <unknown>
E #12 0x561c0d6a1f20 <unknown>
E #13 0x561c0d699923 <unknown>
E #14 0x561c0d66cc0e <unknown>
E #15 0x561c0d6bcb08 <unknown>
E #16 0x561c0d6bcc97 <unknown>
E #17 0x561c0d6cd113 <unknown>
E #18 0x7f73a26e4ea7 start_thread

/usr/local/lib/python3.9/site-packages/selenium/webdriver/remote/errorhandler.py:245: NoSuchElementException
Failed 2023-06-06 12:52:20.503881 test_qa_federation.py::TestMIPQAFederation::test_data[https://qa.hbpmip.link/] Integration tests (data) of the MIP QA Federation. 36.72
screenshot
self = <test_qa_federation.TestMIPQAFederation object at 0x7f2cd96937c0>

def test_data(self):
"""Integration tests (data) of the MIP QA Federation."""
> super().test_data()

test_qa_federation.py:24:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
basetest.py:238: in test_data
histogram_of_rightstgsuperiortemporal_ = selenium_driver.find_element(
/usr/local/lib/python3.9/site-packages/selenium/webdriver/remote/webdriver.py:830: in find_element
return self.execute(Command.FIND_ELEMENT, {"using": by, "value": value})["value"]
/usr/local/lib/python3.9/site-packages/selenium/webdriver/remote/webdriver.py:440: in execute
self.error_handler.check_response(response)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _

self = <selenium.webdriver.remote.errorhandler.ErrorHandler object at 0x7f2cd9570ca0>
response = {'status': 404, 'value': '{"value":{"error":"no such element","message":"no such element: Unable to locate element: {\...wn>\\n#16 0x55a59bac9c97 \\u003Cunknown>\\n#17 0x55a59bada113 \\u003Cunknown>\\n#18 0x7f2f4cf8dea7 start_thread\\n"}}'}

def check_response(self, response: Dict[str, Any]) -> None:
"""Checks that a JSON response from the WebDriver does not have an
error.

:Args:
- response - The JSON response from the WebDriver server as a dictionary
object.

:Raises: If the response contains an error message.
"""
status = response.get("status", None)
if not status or status == ErrorCode.SUCCESS:
return
value = None
message = response.get("message", "")
screen: str = response.get("screen", "")
stacktrace = None
if isinstance(status, int):
value_json = response.get("value", None)
if value_json and isinstance(value_json, str):
import json

try:
value = json.loads(value_json)
if len(value.keys()) == 1:
value = value["value"]
status = value.get("error", None)
if not status:
status = value.get("status", ErrorCode.UNKNOWN_ERROR)
message = value.get("value") or value.get("message")
if not isinstance(message, str):
value = message
message = message.get("message")
else:
message = value.get("message", None)
except ValueError:
pass

exception_class: Type[WebDriverException]
if status in ErrorCode.NO_SUCH_ELEMENT:
exception_class = NoSuchElementException
elif status in ErrorCode.NO_SUCH_FRAME:
exception_class = NoSuchFrameException
elif status in ErrorCode.NO_SUCH_SHADOW_ROOT:
exception_class = NoSuchShadowRootException
elif status in ErrorCode.NO_SUCH_WINDOW:
exception_class = NoSuchWindowException
elif status in ErrorCode.STALE_ELEMENT_REFERENCE:
exception_class = StaleElementReferenceException
elif status in ErrorCode.ELEMENT_NOT_VISIBLE:
exception_class = ElementNotVisibleException
elif status in ErrorCode.INVALID_ELEMENT_STATE:
exception_class = InvalidElementStateException
elif (
status in ErrorCode.INVALID_SELECTOR
or status in ErrorCode.INVALID_XPATH_SELECTOR
or status in ErrorCode.INVALID_XPATH_SELECTOR_RETURN_TYPER
):
exception_class = InvalidSelectorException
elif status in ErrorCode.ELEMENT_IS_NOT_SELECTABLE:
exception_class = ElementNotSelectableException
elif status in ErrorCode.ELEMENT_NOT_INTERACTABLE:
exception_class = ElementNotInteractableException
elif status in ErrorCode.INVALID_COOKIE_DOMAIN:
exception_class = InvalidCookieDomainException
elif status in ErrorCode.UNABLE_TO_SET_COOKIE:
exception_class = UnableToSetCookieException
elif status in ErrorCode.TIMEOUT:
exception_class = TimeoutException
elif status in ErrorCode.SCRIPT_TIMEOUT:
exception_class = TimeoutException
elif status in ErrorCode.UNKNOWN_ERROR:
exception_class = WebDriverException
elif status in ErrorCode.UNEXPECTED_ALERT_OPEN:
exception_class = UnexpectedAlertPresentException
elif status in ErrorCode.NO_ALERT_OPEN:
exception_class = NoAlertPresentException
elif status in ErrorCode.IME_NOT_AVAILABLE:
exception_class = ImeNotAvailableException
elif status in ErrorCode.IME_ENGINE_ACTIVATION_FAILED:
exception_class = ImeActivationFailedException
elif status in ErrorCode.MOVE_TARGET_OUT_OF_BOUNDS:
exception_class = MoveTargetOutOfBoundsException
elif status in ErrorCode.JAVASCRIPT_ERROR:
exception_class = JavascriptException
elif status in ErrorCode.SESSION_NOT_CREATED:
exception_class = SessionNotCreatedException
elif status in ErrorCode.INVALID_ARGUMENT:
exception_class = InvalidArgumentException
elif status in ErrorCode.NO_SUCH_COOKIE:
exception_class = NoSuchCookieException
elif status in ErrorCode.UNABLE_TO_CAPTURE_SCREEN:
exception_class = ScreenshotException
elif status in ErrorCode.ELEMENT_CLICK_INTERCEPTED:
exception_class = ElementClickInterceptedException
elif status in ErrorCode.INSECURE_CERTIFICATE:
exception_class = InsecureCertificateException
elif status in ErrorCode.INVALID_COORDINATES:
exception_class = InvalidCoordinatesException
elif status in ErrorCode.INVALID_SESSION_ID:
exception_class = InvalidSessionIdException
elif status in ErrorCode.UNKNOWN_METHOD:
exception_class = UnknownMethodException
else:
exception_class = WebDriverException
if not value:
value = response["value"]
if isinstance(value, str):
raise exception_class(value)
if message == "" and "message" in value:
message = value["message"]

screen = None # type: ignore[assignment]
if "screen" in value:
screen = value["screen"]

stacktrace = None
st_value = value.get("stackTrace") or value.get("stacktrace")
if st_value:
if isinstance(st_value, str):
stacktrace = st_value.split("\n")
else:
stacktrace = []
try:
for frame in st_value:
line = frame.get("lineNumber", "")
file = frame.get("fileName", "<anonymous>")
if line:
file = f"{file}:{line}"
meth = frame.get("methodName", "<anonymous>")
if "className" in frame:
meth = f"{frame['className']}.{meth}"
msg = " at %s (%s)"
msg = msg % (meth, file)
stacktrace.append(msg)
except TypeError:
pass
if exception_class == UnexpectedAlertPresentException:
alert_text = None
if "data" in value:
alert_text = value["data"].get("text")
elif "alert" in value:
alert_text = value["alert"].get("text")
raise exception_class(message, screen, stacktrace, alert_text) # type: ignore[call-arg] # mypy is not smart enough here
> raise exception_class(message, screen, stacktrace)
E selenium.common.exceptions.NoSuchElementException: Message: no such element: Unable to locate element: {"method":"xpath","selector":"//div[contains(@id,'bar-graph-right-superior-temporal-gyrus')]"}
E (Session info: headless chrome=113.0.5672.126)
E Stacktrace:
E #0 0x55a59bae2133 <unknown>
E #1 0x55a59b816966 <unknown>
E #2 0x55a59b8530dc <unknown>
E #3 0x55a59b853211 <unknown>
E #4 0x55a59b88d6c4 <unknown>
E #5 0x55a59b872bfd <unknown>
E #6 0x55a59b88b1c7 <unknown>
E #7 0x55a59b8729a3 <unknown>
E #8 0x55a59b84746a <unknown>
E #9 0x55a59b84855e <unknown>
E #10 0x55a59baa1cae <unknown>
E #11 0x55a59baa58fe <unknown>
E #12 0x55a59baaef20 <unknown>
E #13 0x55a59baa6923 <unknown>
E #14 0x55a59ba79c0e <unknown>
E #15 0x55a59bac9b08 <unknown>
E #16 0x55a59bac9c97 <unknown>
E #17 0x55a59bada113 <unknown>
E #18 0x7f2f4cf8dea7 start_thread

/usr/local/lib/python3.9/site-packages/selenium/webdriver/remote/errorhandler.py:245: NoSuchElementException
Passed 2023-06-06 12:52:20.500877 test_public_mip.py::TestPublicMIP::test_login_and_accept_terms[https://hbpmip.link/] Test login and accept terms on the public MIP. 52.31
-----------------------------Captured stderr setup------------------------------
[WDM] - Downloading: 0%| | 0.00/6.98M [00:00<?, ?B/s] [WDM] - Downloading: 100%|██████████| 6.98M/6.98M [00:00<00:00, 191MB/s]
------------------------------Captured stdout call------------------------------
Message: no such element: Unable to locate element: {"method":"xpath","selector":"//input[@id='tos']"} (Session info: headless chrome=113.0.5672.126) Stacktrace: #0 0x561c0d6d5133 <unknown> #1 0x561c0d409966 <unknown> #2 0x561c0d4460dc <unknown> #3 0x561c0d446211 <unknown> #4 0x561c0d4806c4 <unknown> #5 0x561c0d465bfd <unknown> #6 0x561c0d47e1c7 <unknown> #7 0x561c0d4659a3 <unknown> #8 0x561c0d43a46a <unknown> #9 0x561c0d43b55e <unknown> #10 0x561c0d694cae <unknown> #11 0x561c0d6988fe <unknown> #12 0x561c0d6a1f20 <unknown> #13 0x561c0d699923 <unknown> #14 0x561c0d66cc0e <unknown> #15 0x561c0d6bcb08 <unknown> #16 0x561c0d6bcc97 <unknown> #17 0x561c0d6cd113 <unknown> #18 0x7f73a26e4ea7 start_thread Message: no such element: Unable to locate element: {"method":"xpath","selector":"//span[. = '×']"} (Session info: headless chrome=113.0.5672.126) Stacktrace: #0 0x561c0d6d5133 <unknown> #1 0x561c0d409966 <unknown> #2 0x561c0d4460dc <unknown> #3 0x561c0d446211 <unknown> #4 0x561c0d4806c4 <unknown> #5 0x561c0d465bfd <unknown> #6 0x561c0d47e1c7 <unknown> #7 0x561c0d4659a3 <unknown> #8 0x561c0d43a46a <unknown> #9 0x561c0d43b55e <unknown> #10 0x561c0d694cae <unknown> #11 0x561c0d6988fe <unknown> #12 0x561c0d6a1f20 <unknown> #13 0x561c0d699923 <unknown> #14 0x561c0d66cc0e <unknown> #15 0x561c0d6bcb08 <unknown> #16 0x561c0d6bcc97 <unknown> #17 0x561c0d6cd113 <unknown> #18 0x7f73a26e4ea7 start_thread
Passed 2023-06-06 12:52:20.502561 test_qa_federation.py::TestMIPQAFederation::test_login_and_accept_terms[https://qa.hbpmip.link/] Test login and accept terms on the MIP QA Federation. 27.56
------------------------------Captured stdout call------------------------------
Message: no such element: Unable to locate element: {"method":"xpath","selector":"//input[@id='tos']"} (Session info: headless chrome=113.0.5672.126) Stacktrace: #0 0x55a59bae2133 <unknown> #1 0x55a59b816966 <unknown> #2 0x55a59b8530dc <unknown> #3 0x55a59b853211 <unknown> #4 0x55a59b88d6c4 <unknown> #5 0x55a59b872bfd <unknown> #6 0x55a59b88b1c7 <unknown> #7 0x55a59b8729a3 <unknown> #8 0x55a59b84746a <unknown> #9 0x55a59b84855e <unknown> #10 0x55a59baa1cae <unknown> #11 0x55a59baa58fe <unknown> #12 0x55a59baaef20 <unknown> #13 0x55a59baa6923 <unknown> #14 0x55a59ba79c0e <unknown> #15 0x55a59bac9b08 <unknown> #16 0x55a59bac9c97 <unknown> #17 0x55a59bada113 <unknown> #18 0x7f2f4cf8dea7 start_thread